Brandon Invergo

Software

Active and/or stable projects [primary language(s) in parentheses]:

  • BioSRC: A Ports-like system for easily installing bioinformatics software [Make]
  • Grotesque: A library manager for interactive fiction [Python]
  • Idioma: A bare-bones language training application [Python]
  • librekontrol: A fully programmable controller editor for Native Instruments music devices [C, Scheme]
  • m4-bloggery: A static website generator [Make, M4]
  • molnet-recon: A suite of tools for reconstructing molecular networks from quantitative data [C]
  • pacnanny: A wrapper for Arch Linux’s pacman package manager that enforces good discipline [Bash]
  • paperq: A tool for managing a reading queue of academic/scientific papers [Bash, C]
  • pyifbabel: A Python implementation of the Treaty of Babel for interactive fiction [Python]
  • seqmi: A tool to quickly calculate mutual information between columns in a sequence alignment [C]
  • tp-helix-orientation-lock: A small daemon program to support screen-orientation locking on the Lenovo ThinkPad Helix 2nd Gen 2-in-1 laptop/tablet in GNOME [C]
  • zeptodb: Tiny tools for manipulating DBM (flat, non-relational) databases [C]

Other projects to which I’ve contributed:

  • Biopython [Python]
  • GNU Source Release Collection: A BSD Ports-like system for easily installing GNU software from source [Make]
  • GNU pyconfigure: Templates for easily implementing the standard GNU configure/install process for Python projects [Autoconf]
  • nwm: I have added quite a few new features. [C, Scheme]
  • st: I contributed patches to implement double-buffering via the XDBE extension (which was eventually removed) and to support mouse scrolling [C]

These are old or uninteresting and are therefore no longer maintained:

  • gedit-bio: Handy biology plugins for Gnome Gedit
  • GeneNetWalk: A user interface for randomly generating point mutations in a biological sequence for experimental design