Brandon Invergo

gedit-bio

Repo

This is a package of some plugins for Gnome Gedit 3 for working with biological sequence data. This is an ongoing project, with new plugins being added basically when I need them. I'm open to requests,though. Please note that any old versions available are for Gedit 2 and are no longer maintained.

Plugins written so far:

  • bio_fasta: clean up your messy FASTA files (make all the lines the same length) (old version)
  • bio_sequencemask: replace the highlighted sequence region with an arbitrary character, useful for masking erroneous regions to prevent them from throwing off analyses (old version)